CDS
Accession Number | TCMCG057C41598 |
gbkey | CDS |
Protein Id | XP_018443800.1 |
Location | complement(join(17164175..17165581,17165703..17165816,17165921..17166049,17166148..17166224,17166329..17166503,17166611..17166808,17167190..17167261,17167331..17167480,17167603..17167680,17167860..17167973,17168104..17168157,17168250..17168408,17168621..17168713,17168854..17168970,17169256..17169358,17169450..17169634,17169750..17169824,17169899..17169982,17170332..17170379,17170497..17170544,17170924..17171103,17171186..17171239,17171329..17171370,17171451..17171549,17171614..17171748,17171841..17172017,17172126..17172175,17172691..17172769,17172864..17172977,17173050..17173154,17173263..17173403,17173586..17173654,17173758..17173861,17173978..17174026,17174292..17174384,17174472..17174592,17175016..17175119,17175471..17175548,17175643..17175732,17175849..17175914,17176001..17176093,17176194..17176304,17176306..17176422,17176500..17176646,17176725..17177039)) |
Gene | LOC108815804 |
GeneID | 108815804 |
Organism | Raphanus sativus |
Protein
Length | 2070aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA344915 |
db_source | XM_018588298.1 |
Definition | PREDICTED: LOW QUALITY PROTEIN: nuclear-pore anchor-like [Raphanus sativus] |
EGGNOG-MAPPER Annotation
Sequence
CDS: ATGCCCTTGTTTATGCCAGACGATGATCTCGCGCGGCTCTCAAACGACGCCGCGTCGGTGGTTGTGGTTGCAGAGAGAGCCGACGAGTACATCCGAAAGCTGTACGCAGATTTGGACAGTGTACGTGCCAAGGCCGATGCTGCTTCCATCACGGCGGAGCAGACGTGCTCGCTCCTCGAGCAGAAGTACCTCTCGCTCTCTCGGGATTTCGCGTCGCTTGAATCTCATAACGCGAAGCTTCAGTCTGATCTCGACGATCGATTGGCTGAGCTCGCGCAGTCTCAGGCGCAGAAGCACCAGCTTCATTTGCAATCGATTGAGAAGGATGGAGAGTTGGAGAGGGTGACGACGGAGATGTCGGAGCTGCATAAGTCCAAGAGGCAACTGATGGAGTTGCTGGAGCAGAGAGATTCTGAGATTAGCGAGAAGAATTCGAATATCAAGAGCTATTTGGAGAAGATTGTTAAGCTGACTGACGCTAGCTCGGAGAAGGAGTCTAGATTTGCTGAAGCAGGAGCTGAATTAGCACGATCGCAAGCTATGTGCTTTCGTTTGTCTCAGGAGAAAGAGCTCATGGAAAGACATACGAAATGGCTTGATGAGGAGTTAACAGCTAAAGTTGATAGCTATGCTGAACTCCGTAGGAGGCATTCTGATCTCGAGGCGGAAATGTCAGCGAAGCTTGTGGACGTTGAGAAGAATTATAATGAGTGCTCTAGTTCGTTGAATTGGCATAAGGAAAGATTGAGAGAGCTCGAAACGAAGATTACTTCATTACAAGAGGAACTCAGCTCGTGTAAAGATGCAGCAACGACGACTGAAGAGCAATACAGTGCTGAGCTTCTCACTGCAAACAAGCTTGTTGAGCTGTACAAGGAAAGTTCGGAGGAATTGTCTAGAAAGGCTGGGGAACTTGAGGGTGTCATTAAGGCCTTAGAGGCACGCTTGAGCCAAGTCGAGATTGGGTATAAAGATAGACTTGAGAAAGAAATGTCTACGAACCAGAAATTAGAGAAGGAGAACGAAGACATTAAACAAAAACTTGAGAAGTATGAAGCAGAAATTGAGAAAACTCGGAAAACGGATGAACTAACGCTTGTACCTTTCAGCAGTTTCACAAGAGGGGTTGACGTTTCTGGGACCAGCAACATGATAGAGGAAAGCAATGAAATGATTTCCAAGGTTCCTGCTGGTGTGTCAGGAACGGCACTGGCAGCATCACTCCTACGTGACGGATGGAGTCTGACCAAAATTTATGAGAAGTATCAAGAGGCTGTTGATGCTATGAGACATGAGCAGTTAGGTCGAAAGGAAGCGGAGTTGATACTACAACGGGTTTTATCCGAATTAGAAGAGAAAGCGGGGTTCATCCAAGAGGAAAGAGGCGAGCATGAGCGTTTGGTTGAAGCTTACTCTCTCGTCAGTCAAAAACTTCAGGATTCTGTCTCTGAACAATCATATATGGAGAAGGTCATCATGGGGCTAAAGGCTGAATTGAGGAAGCGGGAACGTGAAAGTATTCTATATCAGAAAGATATATCTGACCTACAGAAGCAGGTAACGATACTACTGAAGGAGTGTCGTGATGTCCAACTTCGCTGTGTAGCTGCTAGGGATGAAGAAGAAGATGATACCCAGCTTTCTGATGTTGAGATGGATATGGAATCTGAAGCTGATAAAATCATTTCAGAGCATCTTTTGAAGTTTAAAGATATAAATGGACTAGTTGAGCAGAATGTTAAGCTCAGGAATCTTGTTCGTAGTCTCTCAGAGCAGATTGAAAGTAGGGAAATGGAGCTGAAGGAGAAGTATGAGATAGACCTGAAGAAAAAGACTGATGAAGCTTCTTCAAAAGTAGCCATCGTGCTAGAAAGAGCTGAAGAACAGGGTAAAATGATTGAATCACTGCACGCATCTGTTGCAATGTATAAACGACTATATGAAGAGGAACAGAAACTTCATTCATCTAATTCTCATTTTTCAGTTTCTCCTCCAGCTGTAGTGCCAGGAAGGAAGAACTTCTTACATCTGCTTGAGGATTCACAGGAAGCTACTAAGAGAGCCCAAGAAAAAACTTTTGAACGCATTCGAAATCTGGAAGAAGATTTAGCGAAGACTAGGAGTGAGATAATCGCAATAAGGTCTGAGCGGGATAAGTTGTCCATGGAGGCAAATTTTGCTAGGGAGAAACTAGAAGGCATCATGAAAGAATCTGAGCGCAAGAGGGAAGAAATGAACAGTGTTCTGGCAAGAAACATAGAGTTCTCGCAGCTGATCATCGACCACCAACGGAAGTTACGTGAGAGTTCTGAGTCTCTGCATGCAGCGGAAGGGATTTCTAGAAAATTATCTATGGAGGTATCGGTGCTAAAACAAGAAAAAGAGGTGTTATCAAATGCTGAGAAAAGAGCCTCTGACGAAGTTTCTGTTTTATCTCAGAGAGTTTATCGTCTTCAGGCTACCTTGGATACTATCCAGAGTACAGAGGAAGTTCGTGAGGAAGCAAGAGCTGCCGAGAGAAGGAAACAAGAGGAGCATATCAAGCAACTTGAGAAAGAATGGGCTGAAGCTAAAAGAGAATTGCAAGAAGAAAGGAGCAATGCGCGGAATAGCACTTCGGACCGCAATCAAACTTTGAACAATGCTGTTAGGCAGGTCGAAGAAATGGGGAAAGAATTGGCTAATGCCTTGAAGGATGTCTCGGCAGCAGAATCCAGGGCTTCTGTGGCTGAGGCTAGACTTTCTGATTTGGAGAAGAAGATAAGATCTTCAGATCCTAAGGTTCGTGATATGGACAGTGGTGCAGTCGTCTCTCTTTCTGATAATGAGATCTCCGTAGGCCTTCATACTGCTAAAGAAGAAATGGAGAAGTTGAGGGGAGAAGTAGAATCTAGCAAAAGCCACATGCTTCAGTACAAGAGTATAGCTCAGGTGAATGAAACAGCTTTAAAGCAGATGGAATCTGCCCATGAGAACTTCAGAATTGAGGCTGAAAAGACACAGAAATCGTTGGAAGCAGAGCTTGTTTCTCTTAGAGAAAGGGTGTCAGAACTTGAAAACGACTGTATACAGAAATCTGAGCAAATAGCCAATGCTGCTGCAGGAAAAGAAGATGCTCTTGTATCAGCATCAGCTGAAATTGCAAGTCTGAGAGAAGAAAGCTTAGTTAAAAGTTCCCAAATCGAAGCAGTTAATATCCAAATGTCCACTTTGAAAAATGACCTGGAGCAGGAACATGAGAAATGGCGTGTTGCTCAGAGAAATTATGAAAGACAGGTTATTTTGCAGTCTGAAACTATTCAAGAGCTGACGAAAACATCACAGGCTTTGGCTTCCCTTCAAGAGGAGGCATCTGAACTACGTAAATTGGCTGATGCAAGGGGAACGGAAATTTCCGAGCTTACCTCCAAGTGGAGTGAAGAGAAATATATGTTAGAGCAGCAAAAGAATCTAGCGGAGAAGAAGTATCATGAACTCAACGAACAGAACAAAATACTGCATAGCCGACTTGAGGCTATGCATCTTCACTCGGCTGAGAAAGATAGCCGTTCTGGAAAAATGTCATCTGAAAGCACTGGCTCAGATCAACTCGGAGATTCTGGTTTGCAAAGTGTAGTTAATTATTTGCGCAGAACAAAGGAAATAGCTGAAACAGAGATATCACTTATGAGACAGGAAAAATTGCGGTTGCAATCGCAACTTGAGAGTGCCGTGAAGATGGCAGACTCTGCCCGGGGTTCACTTAATGCTGAGCGTGCCAGTACAAGAGCCTCATTATTGACTGAGGATGAAATCAAATCTCTTCAGCTTCAGGTTAATGAGATGAACTTGCTCCGTGAAAGCAACATACAACTCAGGGAGGAAAACAAACACAATTTTGAGGAGTGCCAGAGATTGCGTGAAGTATCTCAAAAGGCTAGGACGGATTTCGAAAACTCAGAAAATCTATTGAAGCAAAAGCAAACCGAGTTAGACTTGTGTATGAAAGAAACGGAGAGGCTAAGGAAGGAGATAGATCTTCAAAAAAGGAGGGTTGATGAGTTGCGAGAGACGTATAAAAACATTGATGTTGCTGACTACAATCGCCTCAAAGATGAAGTGCGGCAATTCGAGGAGAAACTGAAAGGGAAAGATGCTCATATTGAGGAAATCAAGAAGCTTGTGTTAGAGAAGGAGAGTAAGATATCTCTACTAGAGAAGGATCTGACAAATTGCAAAAACGAACTGAGAGAGAGGGAGAAGGATCTAACAAAATGCAAAACAGAACTGAGTGAGAGGGAGAAGAGGTTAGACGCTGCTCAGCAAGCGCAGGTGACTATGCAGTCAGAGATTGAGAATCTGAAAGCAGAGATCTCTAAGTTGAAAGGAGATTCTGAAAGGTACAGAAAATCTTATTCTAACTTTAAGAGAAAGTTCGATAAAGAAAAGGACGACTTAAACAGAGAAAACCAGTCACTCTCTAAACAGTTAGAGGAAGCCAAAGAGGCTGGAAAGAGAACGACAGCTGATGCTACGGTGGAGCAGGCCGTTAAGGAGAGAGATGAAAAAGAACAAAAGATCCAGATATTGGATAATTTTGTTCGTTCACTGAAAGATGACCTTAAAAAGAAGGATGACGAATTAACTAAAGAGAAAACAGAACGCAAATCTGTTGAGAAAGTATTTGGAGACTCCTTGGCCAAAATTAAACAGGAAAAATCAAAAGTAGATGAAGAGCTTGTTAAACTCGAGAGGTATCAGACGGCATTGGCTCAACTCTCTGAAGAATTGGACAAATTGAAGCAAGCTGATGGAAATCTTCCAGAGGGTACTTCAGCTGTTCAGGCTCTCTCTGGAAGCGTATTGAATGACCAAGCCGCTGCGTACGTGTCAGCTGTAGACTATTTTGAACGCATGGCTCGTACTATTGTCCTCAATTCTCAAGATAGCACAAAATCTACTGGTACGGTGACTGAAGCTTCCCCTGCTACAGTTGAGCCTTCAGCCACTGTCAAAGCCTCTCCTTCAAAAGCTCCGGTGGCAACTACCCAACAGCCAACCAAGGAGAAGAGATTGGTTTCGCTGAAACCAAGCGCTGAGATCCGCAGACCGGTTAGGAGGATTAAACGTCCTCAATTTATTAAACCAGAGGAACCTCCTCAAGCTGATGTTGAGATGCCAGAAGCTGAGGGAGCTGGTGATGAAGGAAAACAGCCTTCCTCCCATGTTTTAACAGAGAGCCAAGTAGCCACAATGGCACCACCTGTTCAGACACATGTCCGTAAACGCCAGGCTGATTCATTGGTTTCTGAGCCACAACAAGGGACTCGAGGAGAAACCAGTTCCGAAACTGCACCACCTGCGTCGAAGAAGCCAAAAGGATCCGAGTCCGAACCTGATACTACCGAAGGTGAAACCCTCTCTAAAGAGCCAGACGTGGATGAATCCATGGATGCGACTACTGGCGCCGAGGATGACAATGAAGAAACAGAAGCCGAGACTGCAGAGGAGAAAACTGAGGAAACGACGGAAGCACAACAAGAAAGTGAAGCTGAAGAGCAGGAGAAAGCTGATGAACCCGTAGAAGAGAATCCACCTGAGACAGAAACCATCCCTACGGAAGAAGAGTTTAAGGATCAGACCGAACAAGAGAATCAAGATCTTCTGGCAGACGTGGAATTTGATAAAGAAGAAGGAGAGCTCGATCTAGATACTCTGGAAGATCTTGAAGAAGCCAGGGATGTAGCTACCACACCCACGCAGTCACCTAGTAGGATGGAGACAACAATGGAAGAACCTGAAACAACCATTGAACCACCACTAGAAGATGTTAAAAACGATGTAGCTGCTGAAGAAGCTTCTGATAAACCCAACGATGATAACAATCAACAAGTAGAAGAAACCAATCTCAAGCCAGAGACCACAATCGCTACTCCAGCTTCTGCAAGTCCGAGCGAAACACCAGAAACTGAAGAAGCGAAAAGAGCAGCTTCGCCAAGTAGAACTATTAATATAGCTGATAAAGCAAAAGAGAAAGCAGCTCTAAGACAAGCCGGTGTAGCCACTCTTGGTGGAACACGAACTCCTTCACCGGGCAACCGAGCTCCTTTATCATCCACCCTCAGAGGTCGTGGTCGAATTGCAAACACTCGAGGCGGCAGACTGCCTACTCGTGGTGGCCGAACCCCACGTGGTGGTGGTGGTGGACGTGGCCCACCCCCGAGCCAGCCGTGA |
Protein: MPLFMPDDDLARLSNDAASVVVVAERADEYIRKLYADLDSVRAKADAASITAEQTCSLLEQKYLSLSRDFASLESHNAKLQSDLDDRLAELAQSQAQKHQLHLQSIEKDGELERVTTEMSELHKSKRQLMELLEQRDSEISEKNSNIKSYLEKIVKLTDASSEKESRFAEAGAELARSQAMCFRLSQEKELMERHTKWLDEELTAKVDSYAELRRRHSDLEAEMSAKLVDVEKNYNECSSSLNWHKERLRELETKITSLQEELSSCKDAATTTEEQYSAELLTANKLVELYKESSEELSRKAGELEGVIKALEARLSQVEIGYKDRLEKEMSTNQKLEKENEDIKQKLEKYEAEIEKTRKTDELTLVPFSSFTRGVDVSGTSNMIEESNEMISKVPAGVSGTALAASLLRDGWSLTKIYEKYQEAVDAMRHEQLGRKEAELILQRVLSELEEKAGFIQEERGEHERLVEAYSLVSQKLQDSVSEQSYMEKVIMGLKAELRKRERESILYQKDISDLQKQVTILLKECRDVQLRCVAARDEEEDDTQLSDVEMDMESEADKIISEHLLKFKDINGLVEQNVKLRNLVRSLSEQIESREMELKEKYEIDLKKKTDEASSKVAIVLERAEEQGKMIESLHASVAMYKRLYEEEQKLHSSNSHFSVSPPAVVPGRKNFLHLLEDSQEATKRAQEKTFERIRNLEEDLAKTRSEIIAIRSERDKLSMEANFAREKLEGIMKESERKREEMNSVLARNIEFSQLIIDHQRKLRESSESLHAAEGISRKLSMEVSVLKQEKEVLSNAEKRASDEVSVLSQRVYRLQATLDTIQSTEEVREEARAAERRKQEEHIKQLEKEWAEAKRELQEERSNARNSTSDRNQTLNNAVRQVEEMGKELANALKDVSAAESRASVAEARLSDLEKKIRSSDPKVRDMDSGAVVSLSDNEISVGLHTAKEEMEKLRGEVESSKSHMLQYKSIAQVNETALKQMESAHENFRIEAEKTQKSLEAELVSLRERVSELENDCIQKSEQIANAAAGKEDALVSASAEIASLREESLVKSSQIEAVNIQMSTLKNDLEQEHEKWRVAQRNYERQVILQSETIQELTKTSQALASLQEEASELRKLADARGTEISELTSKWSEEKYMLEQQKNLAEKKYHELNEQNKILHSRLEAMHLHSAEKDSRSGKMSSESTGSDQLGDSGLQSVVNYLRRTKEIAETEISLMRQEKLRLQSQLESAVKMADSARGSLNAERASTRASLLTEDEIKSLQLQVNEMNLLRESNIQLREENKHNFEECQRLREVSQKARTDFENSENLLKQKQTELDLCMKETERLRKEIDLQKRRVDELRETYKNIDVADYNRLKDEVRQFEEKLKGKDAHIEEIKKLVLEKESKISLLEKDLTNCKNELREREKDLTKCKTELSEREKRLDAAQQAQVTMQSEIENLKAEISKLKGDSERYRKSYSNFKRKFDKEKDDLNRENQSLSKQLEEAKEAGKRTTADATVEQAVKERDEKEQKIQILDNFVRSLKDDLKKKDDELTKEKTERKSVEKVFGDSLAKIKQEKSKVDEELVKLERYQTALAQLSEELDKLKQADGNLPEGTSAVQALSGSVLNDQAAAYVSAVDYFERMARTIVLNSQDSTKSTGTVTEASPATVEPSATVKASPSKAPVATTQQPTKEKRLVSLKPSAEIRRPVRRIKRPQFIKPEEPPQADVEMPEAEGAGDEGKQPSSHVLTESQVATMAPPVQTHVRKRQADSLVSEPQQGTRGETSSETAPPASKKPKGSESEPDTTEGETLSKEPDVDESMDATTGAEDDNEETEAETAEEKTEETTEAQQESEAEEQEKADEPVEENPPETETIPTEEEFKDQTEQENQDLLADVEFDKEEGELDLDTLEDLEEARDVATTPTQSPSRMETTMEEPETTIEPPLEDVKNDVAAEEASDKPNDDNNQQVEETNLKPETTIATPASASPSETPETEEAKRAASPSRTINIADKAKEKAALRQAGVATLGGTRTPSPGNRAPLSSTLRGRGRIANTRGGRLPTRGGRTPRGGGGGRGPPPSQP |